Mr. SymBioMath

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The project High Performance, Cloud and Symbolic Computing in Big-Data Problems applied to Mathematical Modeling of Comparative Genomics (Mr.SymBioMath) links different research domains coming up with a coordinated multi-disciplinary approach for the development of tools targeting Big-Data and computationally intensive scientific applications. Generic solutions for Big-Data storage, management, distribution, processing and final analysis will be developed. While these solutions target a broad range of scientific applications, as a concrete proof-of-concept they will be implemented in the Comparative Genomics field of bioinformatics and biomedical domains.

All of these applications are well suited to apply high-performance and cloud computing approaches and present a high potential for commercialisation. Visualization techniques for different output devices ranging from from Virtual Reality environments to mobile devices will be developed to enhance the human understanding of the result data sets.

Publications

Tukora B., C. Anthes, P. Heinzlreiter, D. Kranzlmüller, Large-scale Dynamic Visualization of Multiple Comparative Genomic Data. Poster in: Proceedings of the IEEE Information Visualization Conference (InfoVIs '14), Paris, France, November 2014

Fast Facts

Project Duration

1/02/2013 – 31/1/2017

Contact person

Dr. Christoph Anthes

Funding agency

European Commission Industry-Academia Partnerships and Pathways (IAPP)

Website

www.mrsymbiomath.eu/

Partner Institutions

  • University of Malaga
  • RISC Software GmbH
  • Johannes Kepler University Linz
  • Integromics S.L.
  • Servicio Andaluz de Salud – Hospital Carlos Haya of Spain
  • Leibniz-Rechenzentrum